{"uid":"cap_5SekUGPFFKn52jeCPrO_B","slug":"fasta-quality-validator-587057d3","name":"FASTA Quality Validator","description":"Check supplied FASTA records for malformed headers, duplicate identifiers and invalid sequence characters before dataset ingestion. No functional or safety inference.","url":"https://www.mahastrategies.com/api/v1/micro/biology-fasta-quality?utm_source=zero.xyz","method":"POST","headers":{},"bodySchema":{"type":"object","$schema":"https://json-schema.org/draft/2020-12/schema","required":["input"],"properties":{"input":{"type":"object","required":["type","method","bodyType","body"],"properties":{"body":{"type":"object","required":["dataClass","fasta","alphabet"],"properties":{"fasta":{"type":"string","maxLength":12000,"minLength":1},"alphabet":{"enum":["DNA","RNA","protein"],"type":"string"},"dataClass":{"enum":["public","synthetic"],"type":"string"}},"additionalProperties":false},"type":{"type":"string","const":"http"},"method":{"enum":["POST"],"type":"string"},"bodyType":{"enum":["json","form-data","text"],"type":"string"}},"additionalProperties":false},"output":{"type":"object","required":["type"],"properties":{"type":{"type":"string"},"example":{"type":"object","required":["version","offerId","amountBaseUnits","inputDigest","result","boundaries","receiptDigest"],"properties":{"result":{"type":"object"},"offerId":{"enum":["biology-fasta-quality"],"type":"string"},"version":{"enum":["maha-microproducts/0.1"],"type":"string"},"boundaries":{"type":"array","maxItems":128,"minItems":0},"inputDigest":{"type":"string","maxLength":71},"receiptDigest":{"type":"string","maxLength":71},"amountBaseUnits":{"enum":["4001"],"type":"string"}},"additionalProperties":false}}}}},"responseSchema":null,"example":null,"exampleRequest":null,"tags":["x402"],"displayCostAmount":"0.004001","displayCostAsset":"USDC","priceDynamic":false,"priceHint":null,"priceStatus":"priced","priceSource":"registry","requiresHandshake":false,"reviewCount":0,"rating":{"score":"0.00","successRate":"0.00","reviews":0,"stars":null,"state":"unrated"},"availabilityStatus":"unknown","priceObserved":null,"sessionDeposit":null,"pricing":{"kind":"static","summary":"$0.004001/call","primary":{"kind":"static","protocol":"x402","network":"base","amountUsd":"0.004001","per":"call","confidence":"exact"},"accepted":[{"kind":"static","protocol":"x402","network":"base","amountUsd":"0.004001","per":"call","confidence":"exact"}]},"paymentMethods":[{"uid":"pm_2rQjBgeFMdwtNaxpQNoLe","protocol":"x402","methodType":"crypto","chain":"base","mode":"charge","costAmount":"0.004001","costPer":"request","priority":0,"asset":null,"unit":"request","depositMicros":null,"planRef":null}],"brandName":null,"brandSlug":null,"brandBaseUrl":null,"brandDocsUrl":null,"whatItDoes":"Validates FASTA records for malformed headers, duplicate identifiers, and invalid sequence characters before dataset ingestion","exampleAgentPrompt":"Check this FASTA data for malformed headers, duplicate IDs, or invalid characters before I ingest it — it's public DNA sequence data: >seq1\\nATCGATCG\\n>seq2\\nGCTAGCTA","exampleUseCases":[{"title":"Pre-ingestion genomic pipeline guard","prompt":"Before I load this batch of public DNA FASTA records into my database, run a quality check to catch any malformed headers, duplicate identifiers, or invalid nucleotide characters — here's the FASTA content: >sample_001\\nATCGATCGATCG\\n>sample_002\\nGCTAGCTAGCTA"},{"title":"Synthetic protein sequence QA","prompt":"I've generated some synthetic protein sequences and need to validate the FASTA formatting before submitting them — can you check for bad headers, duplicate IDs, and non-standard amino acid characters in this data: >prot_A\\nMKLVFFAEDV\\n>prot_B\\nACDEFGHIKL"},{"title":"RNA dataset pre-processing validation","prompt":"I'm about to ingest this public RNA FASTA file into a pipeline and want to make sure there are no formatting issues — please validate it for malformed headers, duplicate sequence identifiers, and invalid RNA characters: >rna_seq1\\nAUGCUAGCUA\\n>rna_seq2\\nCGAUCGAUCG"}],"resultDescription":"Returns a structured result object indicating whether the FASTA records passed validation, along with boundary markers for each parsed record, an input digest for traceability, and a receipt digest for payment verification. Specific issues such as malformed headers, duplicate identifiers, or invalid sequence characters are reported in the result object.","failureModes":["FASTA string exceeds 12,000 character limit — request rejected","Invalid alphabet enum value (must be DNA, RNA, or protein)","Malformed JSON body or missing required fields returns an error","Empty FASTA string (minLength 1 not met)","Network timeout or service unavailability"],"whenToPreferThis":"Choose this endpoint when you need a lightweight, programmatic pre-ingestion check on FASTA data specifically for structural and formatting correctness — malformed headers, duplicate IDs, and invalid alphabet characters. It is not a functional or safety inference tool, so use it as a data quality gate before downstream bioinformatics processing rather than for sequence annotation, alignment, or biological analysis. Prefer it over manual inspection for automated pipeline integration where a per-call audit trail (input and receipt digests) is valuable.","instructions":null,"reviewSummary":null,"reviewSummaryHighlights":null,"reviewSummaryConcerns":null,"reviewSummaryGeneratedAt":null,"activationCount":0,"lastUsedAt":null,"lastSuccessfullyRanAt":null,"lastHealthCheckAt":"2026-10-13T12:46:33.460Z","isFirstParty":false,"canonicalSlug":"fasta-quality-validator-587057d3"}